Shicheng-Guo / GEO

GEO dataset for deep analysis

wget -r -l 1 -nd -e robots=off --reject jpg,html https://ftp.ncbi.nlm.nih.gov/geo/series/GSE16nnn/GSE16256/suppl/

Type II GEO Dataset Format: Relations and SuperSeries (GSE16256)

Relations
Reanalysis of	GSM678267
Reanalysis of	GSM678268
Reanalysis of	GSM678269
Reanalysis of	GSM558638

This SuperSeries is composed of the following SubSeries:
GSE94611	Deciphering the genomic, epigenomic and transcriptomic landscapes of pre-invasive lung cancer lesions to determine prognosis I
GSE108082	Deciphering the genomic, epigenomic and transcriptomic landscapes of pre-invasive lung cancer lesions to determine prognosis II
GSE108123	Deciphering the genomic, epigenomic and transcriptomic landscapes of pre-invasive lung cancer lesions to determine prognosis III

DNA Methylation Research

• A-GEOD-13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482_v.1.1)
• A-GEOD-18809 Illumina HumanMethylation450 BeadChip (v1.2, extended annotation)
• A-MEXP-2255 Infinium HumanMethylation450 BeadChip
• A-GEOD-21145 Infinium MethylationEPIC
• GPL13534 HumanMethylation450_15017482
• GPL16304 Illumina HumanMethylation450 BeadChip [UBC enhanced annotation v1.0]
• GPL18809 Illumina HumanMethylation450 BeadChip (v1.2, extended annotation)
• GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
• GPL21145 Infinium MethylationEPIC