Beast code in Giters

Shab86's repositories

lamplink

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awesome-machine-learning

A curated list of awesome Machine Learning frameworks, libraries and software.

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bcbb

Incubator for useful bioinformatics code, primarily in Python and R

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Concordance-calculation

Script to calculate concordances between imputed & typed SNP's

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covld

Estimate linkage disequilibrium between unphased loci

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Genotype-Tools

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Genotype-Tools-Scripts

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gwas_scripts

Codebook from my GWAS cookbook

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hello-world

Start-up exercise in Github

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Rosalind-Bioinfo-Class

Solutions to problems in Rosalind Bioinformatics Track for Algorithms in Bioinformatics class

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https-github.com-jknightlab-impute-tools

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https-github.com-yangjl-phasing

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IBDMUT

Infer mutation and gene conversion rates using identical-by-descent segments

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indelTrim

IndelTrim recodes indels for efficient genotype phasing

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ldpsiz

Ldpsiz is a computer package that estimates the history of population size from data on linkage disequilibrium (LD).

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LinkNe

Estimates effective population size using LD and linkage data

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MAPGD

A program for the Maximum-likelihood analysis of population genomic data.

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mlehot

Software for identifying recombination hotspots using LDhot

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