Sex Chromosome Lab's repositories
CCLE_SexChr
Identifying sex chromosome complement in cancer cell line encyclopedia (CCLE) samples
CURES
Course based research experiences
CancerSexCheck
Identifying sex chromosome complement in cancers.
Cancer_Genomics
Assembling pipelines for our cancer genomics work. This includes neoepitope identification, and sex difference analyses.
VariantCalling
Investigating the effects of different parameters on variant calling genome-wide (A, X, Y, mtDNA)
SexChrCoordinates
Coordinates for genomic features on human X and Y chromosomes.
Placenta_Sex_Diff
Sex differences in full term uncomplicated human placentas
BioinformaticsIntroduction
Tutorials to get started in bioinformatics
Placenta_XCI
Understanding patterns of X chromosome inactivation in full term human placenta
T2T_ChromosomeY
Code for the analyses included in the T2T chromosome Y paper
SexInference
Infer sex from DNA sequencing data and RNA sequencing data
Cancer_CURE
Cancer genomics course-based undergraduate research
CurrentLabPractices
This is where we will update our current genomics and statistical approaches.
Nasonia
Parent and species of origin ASE
Mayo_breast_regional_heterogeneity
Multiregional sampling analysis
PopInf
Quick inference of population history
Scripts_Library
Contains a library of scripts used frequently