Serka-M

Serka-M's repositories

Bioinformatics pipeline for recovery and analysis of metagenome-assembled genomes

Language:PythonGPL-3.033 1 4

Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing

Language:Python21 10

Lightweight bioinformatics pipeline for microbial genome recovery

Language:PythonGPL-3.05 20

Updated version of the longread_umi pipeline

Language:ShellGPL-3.0200

Conda recipes for the bioconda channel.

Language:ShellMIT100

Workflow for high-throughput upload of sequencing data to the European Nucleotide Archive

Language:ShellGPL-3.01 10

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

Language:PythonGPL-3.0000

Repository for scripts and resources used for recovery of Cable Bacteria MAGs from sequenced samples

GPL-3.0000

Minimal but speedy quality control for nanopore reads in Rust :bear:

Language:RustMIT000

Repository for the Copenhagen Biohackathon 2021 challenge of Predicting Optimal pH for Enzyme Activity. Team N-SVAMT.

Language:PythonMIT000

Language:Python000

Config files for my GitHub profile.

010