Selmaan's repositories
Motion_Correction
Code for motion correcting calcium imaging movies
SPI_Mouse_Control
Code for communicating with ADNS3080 chip on MX18 mouse using Teensy 3.1
NMF-Source-Extraction
NMF pipeline for CA source extraction
glmnet_win64
glmnet with working mex compilation fo MATLAB 2016a on Windows 7, with Visual studio 2015 community and Intel Parallel Studio XE 2017 installed
lightning-pose
Accelerated pose estimation and tracking using semi-supervised convolutional networks.
aniposelib
📷 🐊 An easy-to-use library for calibrating cameras in python
AuxFunctions
Small, helpful, general purpose functions used by Selmaan's personal code
ca_source_extraction
Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach.
continuous_time_ca_sampler
The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underlying spike in continuous time.
DeepLearningTutorial
Deep Learning Tutorial Data and Code
DeepLearningTutorials-master
Deep Learning Tutorial Indo
DeepPoseKit
a toolkit for pose estimation using deep learning
Dissertate
Beautiful LaTeX dissertation templates.
RNN-Theano
Training RNNs with Theano in Python
Signal-Processing
Code for processing fluorescence + other traces
StimControl
Software for Controlling 2p Stimulation
V1inf-Datajoint
Class definition and associated files for DataJoint / MySQL
Vermin
Vermin Software and Mazes