SCRC's repositories
EcoSISTEM.jl
Julia package for running dynamic ecosystem and epidemiological simulations
rampvis-api
Node and Python FastAPI based RESTful APIs. The APIs are used by (1) RAMPVIS user interface: https://github.com/ScottishCovidResponse/rampvis-ui and (2) RAMPVIS Infrastructure management user interface: https://github.com/saifulkhan/rampvis-ontology-management-ui
rampvis-ui
This is a React based RAMP VIS visualisation interface. This client uses the REST API: https://github.com/ScottishCovidResponse/rampvis-api
SCRCIssueTracking
Central issue tracking repository for all repos in the consortium
simple_network_sim
Adaptation of a simple network simulation model to COVID-19
scrc-vis-modelling
This is a repository for collating the visual analytics applications built by the visualisation team to support the different modelling teams.
Contact-Tracing-Model
Derived from the FMD model and contact data from Sibylle
Covid19_EERAModel
Simple COVID-19 simulation model with ABC-smc inference
DataRepository
Main data repository for parameter estimates stored in the SCRC data registry
hugo_source_files
When pushes are made to this repository, a GitHub actions workflow automatically deploys source files to the website
modelling-software-checklist
A checklist to help developers of modelling software assess and communicate their level of confidence in the software implementation and its readiness to yield trustworthy results.
data_pipeline_api
API to access the data pipeline
ScottishCovidResponse.github.io
Website containing information related to datasets, the data pipeline, and various other technical documents associated with the SCRC project
scrc-vis-analytical
This is a repository for the visual analytics prototypes built by the visualisation team
SEIR-Model
A simple parameterised Java SEIR
SimulationData.jl
Prototype lightweight datadependency package for Simulation.jl.
cpp-data-pipeline
C++ Wrapper for Python API
data_pipeline_api_cpp
C++ client API for data management pipeline
fdp
A CLI tool for the FAIR Data Pipeline
inference-for-contact-tracing-model
Parameter generation and sensitivty analysis for Scottish Covid
SCRCshinyApp
Shiny app for visualising data (SCRC)
SimpleContactTracing.jl
Simple partner to the java contact tracing repository
temporary_data
Temporary example data repository