SciLifeLab / genologics

Python interface to the GenoLogics LIMS server via its REST API.

SciLifeLab/genologics Issues

"demux" end point
Updated 3 months ago1
UDF handling broken for Python 3.9+ by xml.etree API change
Updated a year ago1
[Function request] A way to download tarfiles.
Updated a year ago
Bug: AttributeError: 'ReadTimeout' object has no attribute 'message'
Updated 3 years ago1
Make this repository the main one
Updated 3 years ago
versioning
Closed 5 years ago2
Create new lab
Updated 6 years ago
Batch create samples
Closed 7 years ago2
Custom configuration path does not work
Updated 7 years ago5
Edit UDF config: "Field is required and must be filled in"
Updated 7 years ago1
versionning issue
Closed 7 years ago1
Sample creation
Updated 7 years ago1
Create new samples
Closed 7 years ago1
error installing genologics on windows machine
Closed 8 years ago
Testing support
Closed 8 years ago5
Adding a numeric UDF returns ElementTree error
Closed 8 years ago2
separating core API from site specific logic
Closed 8 years ago1
Split entities in two
Closed 8 years ago1
Meetup at Genologics UGM in barcelona
Closed 8 years ago3
python 3 compatibility
Closed 8 years ago4
Change to StepActions
Closed 8 years ago1
migration from python2 to python3
Closed 8 years ago7
Caching issues
Closed 8 years ago10
New release on pip?
Closed 8 years ago10
questions about BASEURL in config file
Closed 8 years ago6
problem i copy_reference_genome.py
Closed 9 years ago1
Update udfs with dates.
Closed 9 years ago4
Log is cluttered with requests 'starting new https connection'
Closed 9 years ago3
Mailing list for errors in EPP scripts
Closed 9 years ago1
Consider switching to logbook
Closed 9 years ago1
Don't allow instance creation if id doesn't exists
Closed 9 years ago3
Should "required" empty fields crash the client?
Closed 9 years ago3
Installing from GitHub doesn't work
Closed 9 years ago1
Main log file for all EPP scripts.
Closed 10 years ago4
SSL error
Closed 10 years ago10
Logger causes previous log to be overwritten.
Closed 10 years ago
Using python's "in" syntax with udf dictionaries
Closed 11 years ago
Caching try/except mechanism in entities.py
Closed 11 years ago8