SciLifeLab / NGI-smRNAseq

Nextflow Small RNA Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.

https://ngisweden.scilifelab.se/

SciLifeLab/NGI-smRNAseq Issues

Add option for sequencing centre in BAM file
Closed 6 years ago1
Think about mapping against hairpin only
Closed 6 years ago1
Use bowtie 1 for human genome alignment
Closed 6 years ago4
seed length bowtie and multimappers
Closed 6 years ago14
Generate miRBase alignment references
Closed 6 years ago5
How to cite your work? PMID =?
Closed 6 years ago1
Nextflow v26 throws error
Closed 7 years ago2
Need to trim small RNA adapter
Closed 8 years ago1