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SarahNadeau / bioinf-workflows

This repository has bioinformatics workflows written with Nextflow.

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Bioinformatics Workflows

Trim, annotate, assemble workflow

Steps in the workflow

Example install and run

git clone git@github.com:SarahNadeau/bioinf-workflows.git
cd bioinf-workflows
nextflow run -profile docker main.nf --outpath OUTPATH_DIR --inpath INPUT_DIR

About

This repository has bioinformatics workflows written with Nextflow.

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Language:Nextflow 77.9%Language:Shell 22.1%