Sam's starred repositories
slurm-submit-to-multiple
Submit a job to multiple SLURM partitions
github-readme-stats
:zap: Dynamically generated stats for your github readmes
abcd-hcp-pipeline
bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
nda-abcd-s3-downloader
Tool for downloading ABCD_BIDS inputs and derivatives from the ABCD-BIDS NDA Collection 3165.
csv_extract_airflow_docker
Writes the CSV file to Postgres, read table and modify it. Write more tables to Postgres with Airflow.
freesurfer
Neuroimaging analysis and visualization suite
jekyll-now
Build a Jekyll blog in minutes, without touching the command line.
github-markdown-toc
Easy TOC creation for GitHub README.md
ABCD_data_management
A manual for accessing and working with ABCD data
Microarray-Tutorials
Practice Multi-Platform Microarray Tutorial
neuroCombat_Rpackage
neuroCombat R package
geneExpression_Repository
Maps gene samples into surface parcellation
AI-Catalog
Huge AI models catalog. A curated list of AI tools, platforms, and resources across various domains.
ENIGMA-FreeSurfer-protocol
These protocols are for the analysis of subcortical volume, and cortical thickness and surface area data within FreeSurfer ROI's for ENIGMA working groups.
neuroHarmonize
Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variables with support for NIFTI images. Complements the work in Neuroimage by Pomponio et al. (2019).