SMI's repositories
SmiServices
Scale-able loading, linking and anonymisation of DICOM images for healthcare research environments (e.g. Safe Havens)
BadMedicine.Dicom
CLI / Library for generating dicom files for use in testing applications. Images generated have 'realistic' tag data (based on aggregated tag data in dicom images taken in Scotland).
IsIdentifiable
A tool for detecting identifiable information in data sources (CSV, DICOM, Relational Database and MongoDB)
DicomTypeTranslation
FoDicom/FAnsiSql powered library for converting dicom types into database/C# types at speed.
dicompixelanon
DICOM Pixel Anonymisation
ctp-anon-minimal
A minimal re-packaging of the RSNA MIRC Clinical Trials Processor (CTP), mainly providing the DICOMAnonymizer class
DicomTemplateBuilder
Windows application for building and testing DICOM templates
CogStack-SemEHR
Semantic parsing of Electronic Health Records
ctp-anon-cli
A CLI tool to anonymise files using the RSNA MIRC Clinical Trials Processor (CTP) DICOM Anonymizer
db_analysis
Various scripts used to query any monitor MongoDB
dicom-standard
The DICOM standard, in JSON format, parsed from the HTML version using Python scripts
metacat
Custom medical imaging metadata catalogue including classification based on DICOM metadata
nlp2phenome
Infer patient phenotypes from identified named entities (instances of biomedical concepts)
StructuredReports
DICOM Structured Reports
ansible
Automated deployment of the SMI software stack
dicom-packager
Scripts to package-up directories of DICOM files for transfer
dicom-to-minio
Script to upload directories of DICOM files to MinIO