RobertoDF

BRIO

BRain area Input Output

End2EndPaper

Kilosort

Fast spike sorting with drift correction for up to a thousand channels

AllenSDK

code for reading and processing Allen Institute for Brain Science data

abfload

matlab fuction for reading abf files including v2.0 files

Allen_visual_dataset_artifacts

tables with dataset artifacts

allenCCF

Tools to work with Allen Inst CCF data in matlab

brainrender

a python based software for visualization of neuroanatomical and morphological data.

De-Filippo-et-al-2022

Code for the reproduction of De Filippo et al., 2022.

DeepCCA

An implementation of Deep Canonical Correlation Analysis (DCCA or Deep CCA) with pytorch.

vizs

ecephys_spike_sorting

Modules for processing extracellular electrophysiology data from Neuropixels probes

matlab-plot-big

Makes large MATLAB line plots much faster.

notBoxPlot

plots things that are not boxplots

pd-mkmr

A compilation of vanilla made abstractions

RainCloudPlots

Code and tutorials to visualise your data that is both beautiful *and* statistically valid

RobertoDF.github.io

Robust_Statistical_Toolbox

Robust_Statistical_Toolbox

shadedErrorBar

Produce elegant shaded error bars in MATLAB

sigstar

add significance stars to MATLAB plots

spikes

cortex lab code for electrophysiology

stringer-pachitariu-et-al-2018a

Recordings of 10k neurons during spontaneous behaviors

stringer-pachitariu-et-al-2018b

Responses of 10,000 neurons to 2,800 natural images

test_deploy_website

TIFFStack

Load TIFF files into matlab fast, with lazy loading

TSPE

Total Spiking Probability Edges is a Cross-Correlation based method for effective connectivity estimation of cortical spiking neurons.