Roberto's repositories
Allen_visual_dataset_artifacts
tables with dataset artifacts
brainrender
a python based software for visualization of neuroanatomical and morphological data.
De-Filippo-et-al-2022
Code for the reproduction of De Filippo et al., 2022.
DeepCCA
An implementation of Deep Canonical Correlation Analysis (DCCA or Deep CCA) with pytorch.
brainglobe-heatmap
Rendering anatomical heatmaps with brainrender and matplotlib
ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
licking_behavior_NP
Analysis of mouse licking behavior during visually guided behavior
matlab-plot-big
Makes large MATLAB line plots much faster.
neuropixels_preprocessing
Preprocessing pipeline for Neuropixels recordings using kilosort, additional cluster metrics, Phy2, and export functions to cellbase
notBoxPlot
plots things that are not boxplots
openscope_psycode
This repository contains the stimulus behind the PsyCode project
phy
phy: interactive visualization and manual spike sorting of large-scale ephys data
RainCloudPlots
Code and tutorials to visualise your data that is both beautiful *and* statistically valid
shadedErrorBar
Produce elegant shaded error bars in MATLAB
spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
stringer-pachitariu-et-al-2018a
Recordings of 10k neurons during spontaneous behaviors
stringer-pachitariu-et-al-2018b
Responses of 10,000 neurons to 2,800 natural images