Reproducibility of visualization of GIGGLE scores from the relationships between 15 genomic states across different cell types and tissues predicted by ChromHMM for Roadmap and MyoD ChIP-seq peaks
Reproducibility of visualization of GIGGLE scores from the relationships between 15 genomic states across different cell types and tissues predicted by ChromHMM for Roadmap and MyoD ChIP-seq peaks.
It is a home task (python course)
Articles used:
GIGGLE: a search engine for large-scale integrated genome analysis (https://www.nature.com/articles/nmeth.4556)
Reproducibility of visualization of GIGGLE scores from the relationships between 15 genomic states across different cell types and tissues predicted by ChromHMM for Roadmap and MyoD ChIP-seq peaks