RafeMcBeth

DSandAIforMP.github.io

Website for Data Science and AI for Medical Physicist being taught in Jan 2023 to graduate students in the UPenn Medicial Physics graduate program

aapm_thoracic_challenge

AAPM 2017 Thoracic Segmentation Challenge

autokeras

accessible AutoML for deep learning.

chatgpt-chatbot

This repository will guide you to create ChatGPT like chatbot using OpenAI's GPT 3.5 model

Cortexsys

Matlab GPU Accelerated Deep Learning Toolbox

Deep-Learning-Papers-Reading-Roadmap

Deep Learning papers reading roadmap for anyone who are eager to learn this amazing tech!

dicompyler

Extensible radiation therapy research platform and viewer for DICOM and DICOM RT

DSB2017

Code for 2nd place solution to the 2017 National Data Science Bowl

DSB3Tutorial

filt-back-proj

Filtered backprojection in python without explicit use of Radon transform functions

MachineLearningForMedicalImages

Example code on how to apply machine learning methods to medical images. Contains code (python and python notebooks) and data (DICOM)

Useful-python-for-medical-physics

Scripts that have been useful. Includes some analysis of EGSnrc 3ddose files

filtered-back-projection

Implementation of radon transform and inverse radon transform(using fbp) for image reconstruction.

jupyter-vim-binding

Jupyter meets Vim. Vimmer will fall in love.

kaggle_ndsb2017

Kaggle datascience bowl 2017

lung-segmentation-2d

Lung fields segmentation on CXR images using convolutional neural networks.

lung-segmentation-3d

Lung fields segmentation on tomography images using convolutional neural networks.

MAAS-PlanScoreCard

Medical Affairs Applied Solutions ESAPI tool to create ScoreCards and score plans; in-metric Boolean/expansion; normalize dose to max score

medical-data

OpenKBPRTDosePrediction

Automatic Radiotherapy Treatment Planning ， Knowledge-Based Planning ， Dose Prediction ， Cascade 3D Network (C3D) ，DCNN, Head and Neck , 1st Place Solution to the AAPM OpenKBP challenge

PortPy

Opensource radiation treatment planning system in Python [AAPM'23]

pps

PyPlanScoring codebase that was used on 2017 and 2018 - RT Plan Competition

RafeMcBeth

My personal repository

RafeMcBeth.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

TotalSegmentator

Tool for robust segmentation of 104 important anatomical structures in CT images

VNet

Xvision

Chest Xray image analysis using Deep learning !