RabadanLab / GBMsinglecell

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Single-cell function library

Custom code developed for the following publications:

  • "Single-cell characterization of macrophages in glioblastoma reveals MARCO as a mesenchymal pro-tumor marker" by Chen*, Gartrell*, et al.
  • "ERK1/2 phosphorylation predicts survival following anti-PD-1 immunotherapy in recurrent glioblastoma" by Arrieta*, Chen*, et al.

Dependencies:

matplotlib 3.1.3

pandas 0.25.0

numpy 1.17.1

scipy 1.4.1

sklearn 0.21.3

umap 0.3.10

gseapy 0.9.13

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