Research Scientific Computing

.github

Mission Statement

bulk_rnaseq_fusion_nf

compareRhythms

Approaches to identify Differential Rhythmicity

cutandrun_nf

Cut&Run Alignment, QC, and Peak Calling Pipeline

IGNITE

repo to demo for 2023.11 IGNITE

mack_d_2023.04.13_iPSC_neuromuscular_scRNAseq

Time-course analysis of scRNA-seq from iPSC motor neurons.

multi-package-containers

Testing building mulled containers for multi-requirement tools.

nextflow_scri_config

An SCRI nextflow profile for NF-Core

rnaseq_count_nf

sarek_Aug2023

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

configs

Config files used to define parameters specific to compute environments at different Institutions

modules

Repository to host tool-specific module files for the Nextflow DSL2 community!