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RNA-FRETools

RNA-FRETools

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Software tools for analyzing spectroscopic data, especially FRET, in the realm of structure, dynamics and function of ncRNAs

Location:University of Zurich, University of Applied Sciences Mittweida

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RNA-FRETools's repositories

fretraj

PyMOL plugin to calculate accessible contact volumes on PDB structures

Language:PythonLicense:GPL-3.0Stargazers:8Issues:2Issues:4

MASH-FRET

MATLAB package to analyze single-molecule FRET data

Language:MATLABLicense:GPL-3.0Stargazers:8Issues:3Issues:47

fretlabel

Nucleic acid labeling and all-atom MD simulations with explicit fluorophores

Language:PythonLicense:GPL-3.0Stargazers:4Issues:2Issues:0

Lifefit

Analyze fluorescence lifetime and anisotropy decays. (Mirror of github.com/fdsteffen/Lifefit)

Language:PythonLicense:MITStargazers:4Issues:2Issues:0

FRETraj-demo

Analysis of DNA hairpin dynamics with FRETraj

License:GPL-3.0Stargazers:2Issues:2Issues:2

rna-fretools.github.io

Single-moecule imaging and computation with RNA

Stargazers:1Issues:1Issues:0

.github

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hplc2spect

Analysis of 2D HPLC chromatograms (mirror of github.com/fdsteffen/hplc2spect)

Language:MATLABLicense:MITStargazers:0Issues:2Issues:0

just-the-docs

A modern, high customizable, responsive Jekyll theme for documention with built-in search.

Language:CSSLicense:MITStargazers:0Issues:1Issues:0

rosettascripts

Setup and running scripts for RNA modeling with Rosetta (mirror of github.com/fdsteffen/rosettascripts)

Language:PythonLicense:MITStargazers:0Issues:0Issues:0

Steffen_FRETguided_modeling_2023

De novo models of a manganese riboswitch using Rosetta's FARFAR2

Language:PythonLicense:MITStargazers:0Issues:0Issues:0