Quant-Bio

Quant-Bio

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scRNA-seq-processing-files

A repository that contains files for processing scRNA-seq seurat objects.

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rnaseq_nf-core

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

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kirsch_rad_cpg_immunotherapy

This repository includes all the code for processing scRNA-seq data from our recent publication. Here we show that enhancing radiotherapy response via intratumoral injection of the TLR9 agonist CpG to stimulate CD8 T cells in an autochthonous mouse model of sarcoma

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