PreibischLab / multiview-reconstruction

Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data

PreibischLab/multiview-reconstruction Issues

Problem with Interactive Mode for DoG Interest Point Detection
Updated 5 months ago1
Cannot load n5 interest points in Interest Point Explorer in BigStitcher window
Closed 5 months ago2
Problem with image fusing and quick display
Updated a year ago1
Fusion using ExportN5API does not preserve multi-resolutions
Closed a year ago12
Duplication of InterestPoints not necessary?
Updated a year ago2
Add ome-ngff metadata output to the zarr output of the fused images
Updated a year ago1
Issue with Pairwise shit calculation in latest versions
Closed a year ago2
Error using BDV-compatible hdf5 fusion in BigStitcher
Closed a year ago15
accelerating the deconvolution step for long time series by re-using Fourier kernel?
Updated 2 years ago
Interest point detection in Descriptor based (2d/3d) works but not in Bigstitcher
Updated 2 years ago
MVR "Resave as Tiff" save location not accessible in an ImageJ script
Closed 3 years ago2
parse names with a "-"
Updated 3 years ago10
Multiview reconstruction suddenly lacks Z (failed to reproduce fusion)
Updated 3 years ago1
How to use the ICP sub-routine ?
Closed 5 years ago1
Error opening bounding box dialog
Closed 5 years ago2
Fuse dataset Null Pointer Exception in headless mode
Updated 5 years ago1
Missging tile causes `NullPointerException` when using Manual Loader in BigStitcher
Updated 5 years ago
Optimization II does not provide speedUp
Closed 4 years ago1
Merge cluster jobs doesn't handle stitching results
Updated 5 years ago
Registering a whole data set with beads on only one time point
Updated 5 years ago1
Resaving specific ViewSetups to HDF5 fails
Updated 6 years ago
There are no connected tiles, cannot do an optimization. Quitting.
Closed 4 years ago1
Accessing network shares on windows: FileNotFoundException
Closed 5 years ago5
Detections found interactively but then 0 detections found
Updated 6 years ago4
How to fuse in Fiji Macro using the "default" bounding box
Updated 6 years ago4
Error IndexOutOfBound on new registration
Updated 6 years ago3
Detection of Tiles in CZI dataset when there is only angles
Updated 6 years ago4
Very confused about the new "tiles
Closed 6 years ago1
"Set view colors" not sticking
Updated 6 years ago
Trying to import raw data from LZ1 CZI does not try to fix incorrect stack size
Updated 6 years ago2
Wrong import of 2d tiles
Updated 5 years ago1
Issue assigning PSF
Updated 6 years ago1
ClassCastException in deconvolution step
Closed 6 years ago2
jar file for latest version
Closed 6 years ago2
I made a Docker Image
Updated 7 years ago