Plovor

MpbPPI

MpbPPI: A multi-task pre-training-based equivariant approach for the prediction of the effect of amino acid mutations on protein-protein interactions

ABGNN

PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"

iCache

Source code for iCache-HPCA'23

avvvatars

Beautifully crafted unique avatar placeholder for your next react project

antibody-2019

NAFNet

The state-of-the-art image restoration model without nonlinear activation functions.

webtemplate

收集各种网站前端模板

listen1_chrome_extension

one for all free music in china (chrome extension, also works for firefox)

kepler.gl

Kepler.gl is a powerful open source geospatial analysis tool for large-scale data sets.

binding-ddg-predictor

open source repository

AB-Bind-Database

Antibody Binding Mutational Database

D-SCRIPT

A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions

sru

Training RNNs as Fast as CNNs (https://arxiv.org/abs/1709.02755)

RefineGNN

graph-based-deep-learning-literature

links to conference publications in graph-based deep learning

Absolut

Unconstrained lattice antibody-antigen bindings generator

PyTorch-GAN

PyTorch implementations of Generative Adversarial Networks.

ccf-deadlines

⏰ Collaboratively track deadlines of conferences recommended by CCF (Website, Python Cli, Wechat Applet) / If you find it useful, please star this project, thanks~

pywick

High-level batteries-included neural network training library for Pytorch

NanoNet

STAMP-DPI

MONN

MONN: a Multi-Objective Neural Network for Predicting Pairwise Non-Covalent Interactions and Binding Affinities between Compounds and Proteins

pdbfixer

PDBFixer fixes problems in PDB files

CAGE-Prox

Computer aided proximal decaging as a universal strategy for temporal protein activation

HoTS

HoTS: Sequence-based prediction of binding regions and drug-target interactions.

thuthesis

LaTeX Thesis Template for Tsinghua University

tape

Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.

GraphSol

Code of our JC paper: "Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted contact map"

pyrosetta-basic

drugVQA

Predicting Drug Protein Interaction using Quasi-Visual Question Answering System