Beast code in Giters

Phelim Bradley's repositories

BIGSI

BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data

Language:PythonMIT123 19 28

atlas

Language:PythonMIT5 7 24

metasort

A Digital Health Hack Weekend Project using OneCodex API. Filter reads based on taxonomy assignment from OneCodex.

Language:PythonMIT5 2 3

bigsi-ebi-api

API service for EBI's BIGSI

Language:Python2 50

ga4gh-mongo

A document based Variant database schema inspired by ga4gh Variants schema.

Language:PythonMIT2 2 1

mccortex

Cortex on steroids: for larger populations with better assembly

Language:CMIT2 30

atlas-var

Language:PythonMIT1 40

bioconda-recipes

Conda recipes for the bioconda channel.

Language:Shell1 20

clockwork

CRyPTIC data processing pipelines

Language:HTMLMIT1 20

codemonkeys

Code samples for a WTCHG codemonkey talk

Language:Python1 20

mantis

Mantis: A Fast, Small, and Exact Large-Scale Sequence-Search Index

Language:C++BSD-3-Clause1 20

mykrobe-atlas-cli

Cli tools for Mykrobe atlas and Mykrobe predictor

Language:PythonMIT100

Mykrobe-predictor

This repo has moved to: https://github.com/Mykrobe-tools/mykrobe

Language:PythonNOASSERTION1 20

okta-vue-node-example

Example of a Basic CRUD App with Vue.js and Node

Language:JavaScript1 10

phel.im

phelimbradley.com

Language:Python100

pyseqfile

Fast parsing of multiple sequence file formats using seq_file

Language:PythonMIT1 30

readuntil-server

Language:Python1 7 1

Singularity_recipes

Repository with all my Singularity recipes

MIT1 20

PAC

GPL-3.0000

twillio-sms-survey-2

Language:Python010