PeterMulhair's repositories
ortho_parser
Scripts to parse OrthoFinder output
DToL_insects
Collection of scripts and data useful for analyses of insect genomes
Lepidoptera_homeobox
Data and scripts used in Mulhair et al. 2023 to analyse the evolution of homeobox genes across Lepidoptera
Lepidoptera_opsins
Data and scripts used in Mulhair et al. 2023 to analyse the evolution of opsin genes across Lepidoptera
RNAseq_mapping
Scripts used in the full pipeline of mapping RNA seq reads to genes
useful_scripts
Collections of useful scripts that have been used multiple times
ChemosGeneAnnotation
Pipeline to annotate chemosensory related genes in insects
post_reader
Post CodeML reader analysis to filter spurious reads
Xenaceol_Paralogy
Data and scripts used in Mulhair et al. 2021 to test the effects of hidden paralogy on the placement of Xenacoelomorpha