Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-University Munich's repositories
triangulation
Supplementary data and pipelines for analyzing genome gene content data and morphology to create various phylogenies.
Annotate-GFF
Add annotations to a GFF file
Aphrocallistes_vastus_genome
Aphrocallistes vastus genome
Kingdom-Assignment
A Ruby gem to parse BLASTplus XML output and annotate higher rank taxonomy
Kingdom-Splitter
A Ruby gem to sort out bacterial, archaeal and viral contaminations from genomic data.
2Tethya_genomes
The genome of the contractile demosponge Tethya wilhelma
A-short-LSU-rRNA-fragment-as-a-standard-marker-for-integrative-taxonomy-in-calcareous-sponges
Alignment, secondary structure files, trees & more of Voigt & Wörheide (2016) Organisms Diversity & Evolution 16:53-64. To be used under the Creative Commons CC-BY-NC-ND license, please with quotation of the paper.
CalciteSea
Data repository for Conci N., Griesshaber E., Rivera-Vicéns R., Schmahl W., Vargas S. and Wӧrheide G (2022) Molecular and mineral responses of corals grown under artificial Calcite Sea conditions.
KeratoseMuseOMICS
Data for Agne et al. Keratose sponge MuseOMICS: setting reference points in dictyoceratid demosponge phylogeny
Molecular-biodiversity-of-Red-Sea-demosponges.
Data set repository of Erpenbeck et al. (2016), Marine Pollution Bulletin 105:507-515. To be used under the Creative Commons CC-BY-NC-ND license, please with quotation of the paper.
Montipora_digitata_resources
Companion repository for González-Pech et al.
Spongillida_Minimalist_Barcodes
Repository for: Minimalist barcodes for sponges: a case study classifying African freshwater Spongillida. Authors: Dirk Erpenbeck, Markus Steiner, Astrid Schuster, Martin J. Genner, Renata Manconi, Roberto Pronzato, Bernhard Ruthensteiner, Didier van den Spiegel, Rob W.M. van Soest, and Gert Wörheide
TransPi_paper
TransPi - Supplementary files
PlasticsSponge
Sponges as bioindicators for microparticulate pollutants
Soft-Sponges-Tricky-Tree
Data sets of "Soft Sponges with Tricky Tree: On the Phylogeny of Dictyoceratid Sponges" by Erpenbeck D, Galitz A,Ekins M, Cook SdC, van Soest RWM, Hooper JNA, and Wörheide G. To be used under the Creative Commons CC-BY-NC-ND license, please with quotation of the paper.