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Plot both 2017 and 2020 diagnostic, as a starting point for stepwise analysis
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Share stepwise findings with colleagues
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Create a doitall that runs the 2020 diagnostic
- find R analyses required
- interleave MFCL and R calls
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Send 2020 diagnostic run to John
- converting it to catch conditioning
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Make sure we can run the 2017 diagnostic
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From the 2017 diagnostic, run one-off steps:
- 2017 diagnostic + selectivities
- 2017 diagnostic + otoliths
- 2017 diagnostic + tags
- 2017 diagnostic + age10
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From the 2017 diagnostic, run combinations:
- selectivities + otoliths + tags
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From the 2017 diagnostic, run new selectivity options:
- intermediate steps, e.g., between diagnostic and selectivities
- think of alternative ways to model the selectivities
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Tease apart the CondAge stepwise model run:
- otoliths
- catchability constant between seasons
- catchability constant between years
- maturity not converted to age
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Ask how to change regional structure