Pablo Botas's repositories

LayRareDiseases

Repository to develop layperson descriptions of rare diseases

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word_cloud

A little word cloud generator in Python

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NLP-HPO

Repository aggregating HPO-labelled datasets for NLP development.

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parametric_tsne

Python / Tensorflow / Keras implementation of Parametric tSNE algorithm

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patient-similarity

Phenotype and genotype-based patient similarity

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Patient2Vec

Patient2Vec: A Personalized Interpretable Deep Representation of the Longitudinal Electronic Health Record

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Phen2Gene

Phenotype driven gene prioritization for HPO

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phenolyzer

phenotype-based prioritization of candidate genes for human diseases

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RareCrowds

Package to serve public and freely-available data from rare disease patients.

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snowflake

Snowflake Generator

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