Probabilistic Inference, Privacy and Computational Biology group @ UH

Probabilistic Inference, Privacy and Computational Biology group @ UH's repositories

mGEMS Genomic epidemiology with mixed samples

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mSWEEP High-resolution sweep metagenomics using fast probabilistic inference

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Bayesian Identification of Bacteria

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Analysis of differential RNA splicing from RNA-seq time series data

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A library for probabilistic modeling, inference, and criticism. Deep generative models, variational inference. Runs on TensorFlow.

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Code for experiments in inconsistency of l1-regularised sparse precision matrix estimation

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Example of using BIB to identify Staphylococcus aureus strains

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Experiments for d3p paper

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GPrank - R package

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Repository for the mimic-III models of the hyperparameters and neural architectures in differentially private deep learning master thesis

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tigreBrowser: web-based browser for genomic time course modelling results

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R package for writing tigrebrowser databases

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A clustering method for gene expression time series with multiple replicates which uses Dirichlet processes and Gaussian process

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A supervised time annotation method for omics experiments using Gaussian processes

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