Or Hostezky's repositories
adaptation-in-serial-dilution-co-culture
Large-scale implementation (using the Split-Apply-Combine paradigm) of different metabolic adaptation models of species in a 2-species co-culture, based on a Consumer-Resource modeling framework in a Serial-Dilution setup, where species compete for nutrients that are supplied periodically.
monte-carlo-methods-in-2D-spin-lattice
A highly modular simulation framework of Monte-Carlo methods, based on the Ising Model in a 2D spin lattice. Producing results for the macroscopic properties of the system via simulation and bootstrapping. A few commonly used algorithms are built-in. Model generalizations and additional algorithms can be implemented.
time-dependent-ginzburg-landau-equation__traveling-front
Basic simulations and analysis of a certain traveling-front case of the 1-dimensional Time-Dependent Ginzburg-Landau Equation with a bistable polynomial reaction function. Includes a paper with a detailed account of this work.