OpenMEDLab (openmedlab)

OpenMEDLab

openmedlab

Geek Repo

Promoting large-scale pre-trained foundation models and adaptation in healthcare

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OpenMEDLab's repositories

MedLSAM

MedLSAM: Localize and Segment Anything Model for 3D Medical Images

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PULSE

PULSE: Pretrained and Unified Language Service Engine

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Awesome-Medical-Dataset

Collection of awesome medical dataset resources.

MedFM

Official Repository of NeurIPS 2023 - MedFM Challenge

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Endo-FM

[MICCAI'23] Foundation Model for Endoscopy Video Analysis via Large-scale Self-supervised Pre-train

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CITE

[MICCAI'23] Text-guided Foundation Model Adaptation for Pathological Image Classification

MIU-VL

This is a repository for the ICLR2023 accepted paper -- Medical Image Understanding with Pretrained Vision Language Models: A Comprehensive Study.

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RETFound_MAE

RETFound - A foundation model for retinal image

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SAM-Med2D

SAM-Med2D: Bridging the Gap between Natural Image Segmentation and Medical Image Segmentation

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SAM-Med3D

SAM-Med3D: An Efficient 3D Model for Promptable Volumetric Medical Image Segmentation

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dataset

Related medical image dataset from OpenMedLab and others.

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A-Eval

A-Eval: A Benchmark for Cross-Dataset Evaluation of Abdominal Multi-Organ Segmentation

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Axon-Seg

The Foundation Model for Whole-brain Axon Segmentation and Circuitry Profiling.

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BrainSCK

Implementation code of BrainSCK.

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Osteoarthritis-Benchmark

Benchmark for Assessing Large Language Models on Knowledge and Decision-Making Capacity in Osteoarthritis Treatment.

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ProSST

Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention.

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ProtSSN

Fusion of protein sequence and structural information, using denoising pre-training network for protein engineering (zero-shot).

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