Colin P. Farrell's repositories
MethodsTBS
Targeted Bisulfite Sequencing for Biomarker Discovery
BSBoltManuscript
Supporting Material and Analysis Code for BSBolt Manuscript
EpigeneticPacemaker
Epigenetic Clock - Universal Pace Maker Hill Climbing Code Base
Hoffman2JupyterLauncher
Script to launch a remote jupyter notebook instance
machine-learning-for-trading
Code and resources for Machine Learning for Algorithmic Trading, 2nd edition.
BSB_HTSLIB
BSBolt HTSLIB Fork
Epigenetic-suppression-of-transgenic-TCR-expression-in-ACT
Methylation Vector Analysis
bsb_samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
client-python
A python client library for accessing Polygon's APIs
Demultiplexer
Illumina Lane Demultiplexer
DNA-methylation-at-telomeric-regions
A complex network of interactions governs DNA methylation at telomeric regions
EpigeneticAlterationsInCovid19Infections
Epigenetic Alterations in Covid-19 Infection: Case-Control Study Code
EPM-ModeratorsOfAging
EPM - moderators of epigenetic aging
Machine-Learning-A-Probabilistic-Perspective-Solutions
My solutions to Kevin Murphy Machine Learning Book
MSEPMManuscript
Multistate Epigenetic Pacemaker Manuscript
MultistateEpigeneticPacemaker
Multistate Epigenetic Pacemaker
NuttyLogic.github.io
Professional Blog
Probabilistic-Programming-and-Bayesian-Methods-for-Hackers
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)
pyprobml
Python code for "Probabilistic Machine learning" book by Kevin Murphy
reveal.js
The HTML Presentation Framework
sv-pipeline
Pipeline for structural variation detection in cohorts
uclathes
UCLA Thesis LaTeX style
umap
Uniform Manifold Approximation and Projection
wenda
Weighted elastic net for domain adaptation.