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Nextomics / NextDenovo

Fast and accurate de novo assembler for long reads

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Contigs number less than chromosome number

Wenfei-Xian opened this issue · comments

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I used Nextdenovo to assemble a tomato accession (100X ont), but the contigs number only 10 less than the chromosome number (12 chromosomes). The assemble size is normal. Whether nextdenovo over pursuit the length of contigs N50 ? How to adjust the parameter ?