Naughtoncolin / ORF-Finder

Finds the Open Reading Frames (ORFs) in a nucleotide sequence.

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

FindORFs

Uses imported sequenceAnalysis module to iterate FASTA headers and their complimentary sequences from FASTA file read from directory, finding open reading frames (ORFs) in the sequence.

input: fastA file outputs: FASTA header along with all open reading frames (ORFs) above 100 nucleotides within header's complimentary sequence.

About

Finds the Open Reading Frames (ORFs) in a nucleotide sequence.


Languages

Language:Python 100.0%