NationalGenomicsInfrastructure / piper

A genomics pipeline build on top of the GATK Queue framework

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Incorrect paths for index and reference files when running RNAcounts workflow

jessieno opened this issue · comments

Path to be corrected:
ANNOTATIONS="/proj/a2009002/piper_references/Homo_sapiens/Ensembl/GRCh37/Annotation/Archives/archive-2012-03-09-04-49-46/Genes/genes.gtf"