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National-COVID-Cohort-Collaborative
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Data-Ingestion-and-Harmonization
Data Ingestion and Harmonization
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17
Issues:
113
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12
National-COVID-Cohort-Collaborative/Data-Ingestion-and-Harmonization Issues
OHDSI Vocabulary maps certain procedures in to visit domain. Include these data elements into the visit domain.
Updated
2 months ago
CMS -medicaid - some claimno are associated with multiple patients.
Closed
9 months ago
Comments count
2
CMS : Medicare and Medicaid - governance decision- remove never events from the staging datasets
Closed
9 months ago
Comments count
2
CMS DQP : PPRL linked Cohort visits and domain count comparison
Closed
9 months ago
Comments count
8
CMS DQP Query - how much more data are we adding to the PPRL-linked person from CMS(Medicaid and Medicare)
Closed
9 months ago
Comments count
2
CMS: N3C PPRL linked person IDs have multiple CMS IDs. ( Medicaid and Medicare)
Closed
9 months ago
Comments count
7
CMS: Medicare - Visit_detail rollup to visit_occurrence - SN visits needs to merge dates with 1 day differences as one
Closed
9 months ago
Comments count
24
CMS: Medicaid - two difference race value exist per person in CMS data which is causing dups in person table
Closed
9 months ago
Comments count
3
OMOP pipeline update to support non-standard to standard map using the latest version of the OMOP vocabulary table
Updated
9 months ago
Comments count
9
Assess the current state of OMOP pipeline with non-standard concepts prior to OMOP pipeline updates
Closed
9 months ago
Comments count
6
CMS - Medicare and Medicaid : Need to update the provider characterization files using the newer version of the Compendium file.
Closed
9 months ago
Comments count
3
CMS: Medicaid - LT visits needs to merge visit dates with 1 day differences as one
Closed
9 months ago
Comments count
7
CMS: Medicare and Medicaid - drug_expoure domain data should have overlapping data with EHR as well as additional data from CMS for PPRL linked person
Updated
9 months ago
Comments count
2
crosswalks impacted by possible bad relationships in OMOP concept_ancestor table.
Updated
9 months ago
Comments count
1
PCORnet pipeline updates to support CDM v6.1 changes
Closed
9 months ago
Comments count
6
CMS: Medicare and Medicaid - Episode of Care
Updated
a year ago
Comments count
2
CMS : Medicare and Medicaid- Refine macro visit - make changes such that it adhere close to N3C macro visit - limit to inpatient visit types
Updated
a year ago
CMS: Medicaid - 196 person have multiple race values and 692 multiple ethnicity values
Closed
a year ago
Comments count
1
We are receiving immunization data with NDC code type that is not found in OMOP Vocabulary tables
Closed
a year ago
Comments count
2
CMS : medicaid - low number of outpatient visit is detected
Closed
a year ago
Comments count
1
CMS: Medicare - low number of Durable Medical Equipment is getting to the staging dataset
Closed
a year ago
Comments count
1
CMS: Medicare and Medicaid - ED to inpatient visit or Inpatient visit based on the revenue codes
Updated
a year ago
person contains multiple addresses in cms claims source. Is there a column we can reference to select the most recent one?
Closed
a year ago
Comments count
2
unit string for gram per deciliter
Closed
a year ago
Comments count
1
Add CI checks for SSSOM mapping sets in mapping commons
Updated
a year ago
Support string type for the NLP datasets ids
Closed
2 years ago
Comments count
2
Provide a hot fix to address OMOP Vocab bug for COVID Visit(HCPCS code 704057 ) mapped to COVID dx in condition
Closed
2 years ago
Comments count
4
NOTE and NOTE_NLP dataset are being submitted by all CDMs. Need to process them and add them to the Data Catalog
Closed
2 years ago
Comments count
2
duplicate rows are found in the control_map datasets
Closed
2 years ago
Comments count
2
Make control_map dataset available from the data catalogue.
Closed
2 years ago
Comments count
3
two different ADTEvent at the same date and time for the same person and encounter should be flagged as duplicate.
Closed
2 years ago
Comments count
3
some site is submitting SDoH concepts in LOINC as well as in SNOMED. And the SNOMED the answers can be in both numerical as well as categorical
Updated
2 years ago
some sites are sending true for the long covid flag in TriNetX CDM instead of t as specified -support both flavors
Closed
2 years ago
Comments count
1
SDoH answer codes can be submitted in multiple flavors, i.e. LOINC:LA prefix or LA prefix
Closed
2 years ago
Comments count
3
Map Oxygenation and ventilator data to device_exposure for three CDM sources
Closed
2 years ago
Comments count
8
ADT data coming in from the source CDM should be mapped to VISIT_DETAIL domain
Closed
2 years ago
Comments count
8
Add logic to support SDoH concept's categorical answer code map.
Closed
2 years ago
Comments count
5
Issue raised by PamBanning regarding the LOINC code correction via TestNorm tool
Closed
2 years ago
Comments count
1
ACT CDM : long-COVID clinic visit data in ACT CDM is submitted via the observation_fact table. Add logic to handle this specialty clinic visit data.
Closed
2 years ago
Comments count
4
need to re-map preceding_visit_occurrence_id in visit_occurrence and in visit_detail domain.
Closed
2 years ago
Comments count
1
In TriNetX CDM: long covid clinic visit flag is set in a new column in encounter, "is_long_covid", new logic need to be added to process this data.
Closed
2 years ago
Comments count
1
Establish minimum required data per CDM for successful upload / initiation of payloads into DI&H pipeline
Closed
2 years ago
Comments count
3
Sites are sending in domain data associated with multiple person_id
Closed
2 years ago
Comments count
3
site are sending in visit_occurrence data with person not in the person table
Closed
2 years ago
Comments count
2
missing valueSet mapping concept ids for language cd in TrinetX dataSet
Closed
2 years ago
Comments count
2
We are missing SARS-Cov-2 Test Results for Sites 6000
Closed
4 years ago
Comments count
2
VUMC Gateway Access
Closed
4 years ago
Comments count
1
Additional mapping logic need for transforming observation_fact table in ACT
Closed
4 years ago
Comments count
1
missing concept ids for ACT
Updated
4 years ago
Comments count
2
Multi-map Concept ids for a given ICD10 codes issue reported from foundry.
Closed
4 years ago
Comments count
1
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