docker2singularity
Demo
This demo will convert a Docker container into a Singularity container, starting from a Dockerfile.
NOTE: Workflow designed for macOS with Docker and Vagrant installed, see Software notes below.
You can run the entire demo workflow with
make all
Step-wise Workflow
- create the demo Docker container for conversion to Singularity
make docker
- make sure the demo Docker is working
make docker-test
output:
FastQC v0.11.5
- setup the docker2singularity container and convert the demo Docker to Singularity
make docker2singularity
- load and test the converted Singularity container in Vagrant
make vagrant
output:
...
...
FastQC v0.11.5
Connection to 127.0.0.1 closed.
- if something broke along the way, reset with:
make clean
Software
Tested with:
-
Docker version 17.09.1-ce, build 19e2cf6
-
Vagrant 2.0.1 (see installation notes in
install_vagrant.md
) -
macOS Sierra 10.12