==================================================================== smsMap 04/01/2019 ver1.0.0 ICI/LIFT, China ==================================================================== System Requirements =================== Software Requirements --------------------- The smsMap is supported on the following operating systems Linux Windows 7 Windows 10 Hardware Requirements/Recommendations ------------------------------------- Intel Core i3 2100 or later for Windows Color display capable of 1024 X 768 pixel resolution Memory Requirements/Recommendations ------------------------------------- smsMap requires approximately 2G of available disk space on the drive or partition. smsMap requires a minimum of 8G of RAM for mapping long noisy SMS reads. User's Guide ================= Input Sequences Requirements ---------------------------- Input file requires fasta or fastq format Execute Step ------------ Step 1: compile codes using make command Step 2: ./locate or ./smsMap then come out options reuired A running example ----------- ./locate --index genome.fa ./locate --search genome.fa --seq reads.fa >pos.txt ./smsMap --seq reads.fa --genome genome.fa --pos pos.txt --out smsMap_aligned.txt The final mapping file is smsMap_aligned.txt Copyright Notice =================== Software, documentation and related materials: Copyright (c) 2019-2021 Institute of Control & Information(ICI), Northwestern Polytechnical University, China Key Laboratory of Information Fusion Technology(LIFT), Ministry of Education, China All rights reserved.