NEONScience / NEON-utilities

Utilities and scripts for working with NEON data. Currently: an R package with functions to join (stack) the month-by-site files in downloaded NEON data, to convert data to geoCSV format, and to download data from the API.

NEONScience/NEON-utilities Issues

Reduce disk space requirement for eddy covariance download
Updated 3 months ago2
Add citation generator
Closed a year ago1
Provide rda files in cross-language format
Closed a year ago4
Precip data from AQU site co-located with TIS site will not download
Closed a year ago
The 2022 AOP data has a .json error and cannot be downloaded
Closed 2 years ago3
Allow zipsByUri() to accept R objects as input
Closed 2 years ago1
Unable to update NEON-utilities in Cyverse
Closed 2 years ago2
Obtain each tree record for a site
Closed 2 years ago1
loadByProduct Fails for sls at TALL for 2019-06
Closed 2 years ago2
new error in loadByProduct()
Updated 2 years ago3
Difficulty publishing to shinyapps.io because description file still points to Bioconductor
Closed 3 years ago2
Version 2.1.2 not getting data that does exist
Closed 3 years ago1
readr 2.0.0 breaks stackByTable()
Closed 3 years ago2
Select release in zipsByProduct()
Closed 3 years ago4
Stacking tables failure
Closed 3 years ago3
merge issue on stack eddy when using level = dp01
Closed 3 years ago19
regularize raster orientation in footRaster
Closed 3 years ago
stackByTable("..zip") can't find DP code
Closed 3 years ago2
possible bug in getDatatable(), full table not downloading
Closed 3 years ago5
download specific table(s) with loadByProduct rather than all tables
Closed 4 years ago2
add stackByTable option to use neonstore archive
Closed 4 years ago1
stackEddy fails when folder contains .gz files
Closed 4 years ago14
stackByTable() failure on some sensors
Closed 4 years ago2
loadByProduct and stackByTable
Closed 4 years ago2
getReadmePublicationDate seems to output many duplicates of each readme
Closed 4 years ago4
loadByProduct error when requesting Tick data at all sites (DP1.10093.001)
Closed 4 years ago3
zipsByURI not unzipping with new raw DNA sequence file format
Closed 4 years ago5
Delete stackByTable's temp folder after stacking is complete
Closed 4 years ago3
Mutiple referenceElevations listed for the same sensor ID (HOR.VER) at the same time
Closed 4 years ago2
Data cannot always be uniquely tied to the sensor that collected them in loadByProduct
Closed 4 years ago2
loadByProduct() fails while stacking for DP1.20093.001
Closed 4 years ago2
loadByProduct() returns incorrect encoding for Algae taxa, probably other taxonomic groups as well
Closed 4 years ago3
stackByTable fails to accumulate data for some site-month-products
Closed 4 years ago3
byTileAOP() can't find tiles under other site names or UTM zones
Closed 4 years ago4
Water quality DP1.20288.001 bug when used with avg=
Closed 4 years ago1
Handle DP1.30012.001 correctly
Closed 4 years ago1
All folders are deleted during cleanBy
Closed 4 years ago3
Potential for infinite loops in byTileAOP
Closed 4 years ago3
Joining phenology data objects
Closed 4 years ago4
Hanging downloads in byFileAOP?
Updated 4 years ago4
Wrong 'vctrs' version loading with neonUtilities
Closed 4 years ago3
loadByProduct bug introduced between 1.3.2 and 1.3.0.
Closed 5 years ago4
Error in getting averaged sensor data
Closed 5 years ago2
have DP1.30003.001 work with byTileAOP() function
Closed 5 years ago4
stackByTable reading wrong dpID
Closed 5 years ago1
query by domain in zipsByProduct
Updated 5 years ago1
Avoid downloading files that exist with byTileAOP?
Closed 5 years ago3
StacyByTable cannot open the zip file
Closed 5 years ago4
neonUtilities Install Errors and Warnings
Closed 5 years ago6
Add UTF-8 encoding
Closed 5 years ago3