NCMlab / ProcessModelsPython

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ProcessModelsPython

MakeScripts.py

This defines all of the parameter values to cycle over. It also writes out the scripts to submit to the the cluster queue. At the same time it creates a submission list CSV file to keep track of all of the simulations it is running.

OrganizeResults.py

This reads through all of the simulations results files and organizes them into a single table.

SubmissionHandler.py

This script checks on teh cluster queue and resubmits jobs as needed.

CheckSubisssions()

This reads the submission list CSV file and checks all of the results files. If there are results available it updates the submision list CSV file.

ResubmitJobs()

If a result file is not available for a simulation, the batch job is submitted to the queue again.

ProcessTools()

This should take as input: NBoot, NPower, ParameterList (betas, sample size), Model, OutDirectory

I can use the BatchArray input for the sample sizes. I need to define in teh code an array and the SBATCH Array will provide an index to that array.

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License:MIT License


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