MurrellGroup

lineages

Results from a model of global SARS-CoV-2 lineage competition

ProtPlot.jl

Protein ribbon plots implemented in Julia using Makie

MolecularEvolution.jl

A Julia framework for developing phylogenetic models

NextGenSeqUtils.jl

NextGenSeqUtils:

RobustAmpliconDenoising.jl

RobustAmpliconDenoising.jl:

WebBlast.jl

AssigningSecondaryStructure.jl

Simplified DSSP algorithm implemented in Julia

Diffusions.jl

RotationMap.jl

3D Rotation Map

Backboner.jl

Types and utilities for handling backbones

Conflux.jl

Single-node data parallelism in Julia with CUDA

NanobodyMiner

CodonMolecularEvolution.jl

DPMeansClustering.jl

DPMeansClustering:

FuNGS

Contains code and intermediate data for the analysis of nanobody repertoires from the alpaca named "Funny".

InvariantPointAttention.jl

Julia implementation of AlphaFold 2's Invariant Point Attention

LearningSchedules.jl

Simple Learning Schedules in Julia

MultinomialLogisticGrowth

BatchedTransformations.jl

CHMMera

ColabMPNN.jl

Julia wrapper for the MPNN submodule in the ColabDesign Python package: https://github.com/sokrypton/ColabDesign

ConditionalDensityLayers.jl

DiscriminativeSeroprevalence

Inferring seroprevalence from ELISA data, without choosing a cutoff.

GitDashIt.jl

GitHub is a free dashboard you can push plots to.

highlighterplotting

ManifoldFlows.jl

MatchRBDs

MessagePassingIPA.jl

PORPIDpipeline

A pipeline for long-read UMI/PID sequencing of HIV amplicons.

RandomFeatures.jl