JH.Zhang's repositories

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openfold

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

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AIRS

Artificial Intelligence for Science (AIRS)

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bonito

A PyTorch Basecaller for Oxford Nanopore Reads

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Book2_Beauty-of-Data-Visualization

Book_2_《可视之美》 | 鸢尾花书:从加减乘除到机器学习;36章草稿只差一章,还会经过两轮大修大改,欢迎批评指正

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chemCPA

Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.

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cs229-2018-autumn

All notes and materials for the CS229: Machine Learning course by Stanford University

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Deeprank-GNN

Graph Network for protein-protein interface

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flash-attention

Fast and memory-efficient exact attention

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free-programming-books

:books: Freely available programming books

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GPTs

leaked prompts of GPTs

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hello-algo

《Hello 算法》:动画图解、一键运行的数据结构与算法教程,支持 Java, C++, Python, Go, JS, TS, C#, Swift, Rust, Dart, Zig 等语言。

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hyena-dna

Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena

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JavaGuide

「Java学习+面试指南」一份涵盖大部分 Java 程序员所需要掌握的核心知识。准备 Java 面试,首选 JavaGuide!

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labs

Rmd source files for the HarvardX series PH525x

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List-of-genshin-University

原神高校联盟清单

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making-it-rain

Cloud-based molecular simulations for everyone

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protein-ligand-GNN

This repository contains the code for the work on protein-ligand interaction with GNNs and XAI

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rdkit

The official sources for the RDKit library

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rf_diffusion_all_atom

Public RFDiffusionAA repo

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RiboFold

Open source code for RiboFold: Fast and Accurate RNA 3D Structure Prediction with Deep Learning.

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Smart5UTR

MTAE-based 5UTR design model

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spikingjelly

SpikingJelly is an open-source deep learning framework for Spiking Neural Network (SNN) based on PyTorch.

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sra-tools

SRA Tools

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xgboost

Scalable, Portable and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, for Python, R, Java, Scala, C++ and more. Runs on single machine, Hadoop, Spark, Dask, Flink and DataFlow

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