MoTrPAC's repositories
MotrpacRatTraining6moData
Data for analysis of the MoTrPAC endurance exercise training study in 6-month-old rats
MotrpacBicQC
R package for the MoTrPAC community
MotrpacRatTraining6mo
Analysis of the MoTrPAC endurance exercise training study in 6-month-old rats
motrpac-rna-seq-pipeline
WDL implementation of harmonized RNA-seq pipeline for MoTrPAC project
motrpac-atac-seq-pipeline
MoTrPAC implementation of the ENCODE ATAC-seq pipeline
motrpac-frontend
User interface and Frontend for MoTrPAC Bioinformatics Center
motrpac-tools
Scripts and Tools useful for MoTrPAC
motrpac-proteomics-pnnl-prototype
Testing implementation of PNNL pipeline on BIC infrastructure
clinical-sample-batching
Batching script for clinical samples
motrpac-backend-utils
Python package to unify utilities used by different backend services in the MoTrPAC Bioinformatics Center
motrpac-proteomics-pipeline
MoTrPAC cloud-based proteomics data analysis pipeline
motrpac-rat-training-mitochondria
MoTrPAC rat training mitochondria companion.
motrpac_candidate_starter
A starter react application for programming exercise.
MotrpacRatTraining6moWAT
Helper Functions for the MotrpacRatTraining6moWATData R Package
MotrpacRatTraining6moWATData
Data and analysis results for the MoTrPAC PASS1B rat white adipose tissue manuscript
MotrpacRatTrainingPhysiologyData
Data and analysis results for the MoTrPAC PASS1B rat physiology manuscript
exercise-transcriptome-meta-analysis
A React frontend (for those who are interested in the transcriptomic changes in response to endurance and resistance exercise or training in human blood or skeletal muscle) to query the results from a meta-analysis of publicly available transcriptomes.
motrpac-rrbs-pipeline
Pipeline for analysis of RRBS data, currently being based of MSSM pipeline
MotrpacRatTraining6moQCRep
Post-quantification analyses of multi-omic multi-tissue data from the MoTrPAC endurance exercise training study in young adult rats