Mr Ma's repositories
abide
ABIDE Preprocessed Initiative
ACNet
Asymmetric CNN for image super-resolution (IEEE Transactions on Systmes, Man, and Cybernetics: Systems 2021)
brainstorm
Implementation of "Data augmentation using learned transforms for one-shot medical image segmentation"
ConvNeXt
Code release for ConvNeXt model
docker-fsl
FSL docker container for Brainlife use
DRMIME
DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration
examples
A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.
Fast-Symmetric-Diffeomorphic-Image-Registration-with-Convolutional-Neural-Networks
Fast Symmetric Diffeomorphic Image Registration with Convolutional Neural Networks
GeodisTK
geodesic distance transform of 2d/3d images
ICNet
Inverse-Consistent Deep Networks for Unsupervised Deformable Image Registration
image-reconstructor-patches
Reconstruct Image from Patches with a Variable Stride
Improved-Body-Parts
Simple Pose: Rethinking and Improving a Bottom-up Approach for Multi-Person Pose Estimation
intensity-normalization
normalize the intensity of several MR image contrasts with various routines
MRI_intensity_normalization
Intensity normalization of multi-channel MRI images using the method proposed by Nyul et al. 2000
normalized_gradient_field_pytorch
pytorch implementation of registration metric Normalized Gradient Field
py-hausdorff
Fast computation of Hausdorff distance in Python
Pytorch-Memory-Utils
pytorch memory track code
pytorch-meta
A collection of extensions and data-loaders for few-shot learning & meta-learning in PyTorch
RWCNet
Official implementation of Recurrence with Correlation Network for Medical Image Registration
SDHNet
[TMI 2023] Self-Distilled Hierarchical Network for Unsupervised Deformable Image Registration
SimpleElastix
Multi-lingual medical image registration library
Swin-Unet
The codes for the work "Swin-Unet: Unet-like Pure Transformer for Medical Image Segmentation"
torch-lddmm
GPU and CPU implementation of LDDMM image registration
Transformer_for_medical_image_analysis
A collection of papers about Transformer in the field of medical image analysis.
voxelmorph
Unsupervised Learning for Image Registration