MindTheGap: Quantifying the completeness of the stratigraphic record and its role in reconstructing the tempo and mode of evolution's repositories
CarboCATLite
CarboCATLite model by Peter Burgess
CarboKitten.jl
Julia implementation of carbonate platform model
anchoring-late-devonian-mass-extinction
Code and data for
Cross-comparison
Comparing the outputs of implementations of the diagenetic model by Ivan L'Heureux (2018)
LMA-Matlab
Matlab implementation of the model by L'Heureux (2018) generating self-organized Limestone-Marl Alternations
preservation-orbital-forcing-carbonate-successions
Preservation of Orbital Forcing in Incomplete Carbonate Successions
reactive-transport-model-for-limestone-marl-sequences
Integrating diagenetic equations using Python, inspired by LMA-Matlab, which was created by Niklas Hohmann
carbocat-notes
Johan's notes and doodles on CarboCAT
CarbonateStratPalEvo
Code for "Identification of the Mode of Evolution in Incomplete Carbonate Successions"
code_analysis
Tool to visualize some of the Matlab code
DarwinCAT_SoTL
Improving student understanding of the fossil record - a Scholarship of Teaching and Learning approach
LHeureuxEqs
Analytical considerations on the model by L'Heureux (2018)
LMA_utils
Utility scripts to examine and plot the output of the reactive transport model
paleoTS_test
Examine paleoTS model selection performance with time series length
ShellbedCondensator
Shiny app visualizing the effects of sedimentary condensation
CarboCAT_utils
Extracting data from CarboCAT model outputs
MindTheGap-ERC.github.io
Project webpage
nonparam_est_adm_supp
Supplementary data and code for "Nonparametric estimation of age-depth models from sedimentological and stratigraphic data"
R.Pijnenburg_BSc
BSc thesis of Robin Pijnenburg
rhythmite
FDM-based code which solves the 5 coupled nonlinear diagenetic PDEs of L'Heureux (2018) https://doi.org/10.1155/2018/4968315
stochUtils
Utility functions for probability theory
stratorder
Quantify stratigraphic order
StratPal_workshop_materials
Workshop materials for modeling pipelines in stratigraphic paleobiology using the StratPal package