Milad Bastami's repositories
ABC-Enhancer-Gene-Prediction
Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
coding-interview-university
A complete computer science study plan to become a software engineer.
csvtk
A cross-platform, efficient and practical CSV/TSV toolkit in Golang
dbsnp
dbSNP
DeePathology
Tissue and Cancer Type Identification using Deep Neural Networks
gnomad_methods
Hail helper functions for the gnomAD project and Translational Genomics Group
harmony2019
Reproduce analyses in Harmony Manuscript
Milad-Bastami.github.io
My Research Portfolio on GitHub
miRNA_SNP
Codes for microRNA polymorphism project
mgrb-manuscript
Analyses supporting the Medical Genome Reference Bank manuscript
project-based-learning
Curated list of project-based tutorials
R_Docker_Intro
This is a tutorial that is meant to introduce the concept of Docker to new users.
rapids-single-cell-examples
Examples of single-cell genomic analysis accelerated with RAPIDS
reproducible-computational-workflows
A Practical Introduction to Reproducible Computational Workflows (ISMB/ECCB 2019 Tutorial AM4)
rgcookbook
R Graphics Cookbook