MikeDacre

careful_rm

A safe wrapper for rm that adds useful warnings and an optional recycle/trash mode

tmux-zsh-vim-titles

Unified terminal titles in tmux, zsh, and vim/nvim

fyrd

Submit functions and shell scripts to torque and slurm clusters or local machines using python.

cdbk

A ZSH plugin to allow easy named directory creation - shortcuts to any directory you want

mike_tools

My little python functions that I use often enough to warrant their own repo

nvim

My neovim config

LDDirection

Get information about direction of agreement for any two lists of SNPs, based on LDlink and plink

wiretabs

Wireguard client that exposes itself as a socks5 proxy for use with Firefox Containers

.vim

My personal .vim folder. Uses vim-bundle and pathogen to manage plugins. Not intended for public use, there are better .vimrc files out there; feel free to use it however you please though!

chatgpt-telegram-bot

🤖 A Telegram bot that integrates with OpenAI's official ChatGPT APIs to provide answers, written in Python

dbSNP

A python interface to a dbSNP database, uses SQLAlchemy

grasp

A Simple GRASP (grasp.nhlbi.nih.gov) API based on SQLAlchemy and Pandas

tmux-zsh-environment

Share environmental variables more seamlessly between tmux and ZSH

risk_alleles

Handle risk allele DB

studentcorps

Community OutReach Pandemic Service Resources

bilitoolparser

Web app to send structured data to emr.bilitool.org and return an EPIC compatible template

conda_pyenv_switch

A simple zsh function to switch anaconda and pyenv in the PATH

depict

DEPICT code, instructions and an example

dinucleotides

Get dinucleotides and trinucleotides

HiC-Pro

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing

kmer_trinucleotide

Compare trinucleotide effects for any list of kmers with wieghts

lanyon

A content-first, sliding sidebar theme for Jekyll.

MACS

MACS -- Model-based Analysis of ChIP-Seq

minimal-mistakes

:triangular_ruler: A flexible two-column Jekyll theme. Perfect for personal sites, blogs, and portfolios hosted on GitHub or your own server.

nextcloud-snap

☁️📦 Nextcloud packaged as a snap

OpenVPN-Admin

Install and administrate OpenVPN with a web interface (logs visualisations, users managing...)

Pascal

pascal_mod

A version of pascal based on the executable on the website: https://www2.unil.ch/cbg/index.php?title=Pascal

quickstart-jekyll

My version of so-simple for new websites

vim-checkbox

Vim plugin for toggling and managing checkboxes.