MichelleKendall

epi_impacts_NHS_COVID-19_app_first_year

Code to support the paper "Epidemiological impacts of the NHS COVID-19 app in England and Wales throughout its first year"

drivers_of_epi_dynamics_from_nhs_covid19_app_measurements

Code to reproduce the findings presented in the paper *Drivers of epidemic dynamics in real time from daily digital COVID-19 measurements* by Kendall et al.

MichelleKendall.github.io

Source for my website

phyloTop

Calculating Topological Properties of Phylogenies

UK_recent_R_estimate

Code to provide an estimate of the UK R rate at the most recent possible date using PHE case data

EpiEstim

A tool to estimate time varying instantaneous reproduction number during epidemics

OpenABM-Covid19

phangorn

Phylogenetic analysis in R

Public_NHS_COVID-19_app_data_analysis

Simple analyses of public data from the NHS COVID-19 app and government dashboard data

RWTY

R We There Yet?

treespace_shiny

Web-based version of the treespace Shiny app