CAP2
This repository contains code for the second version of the MetaSUB Core Analysis Pipeline. This pipeline is in Beta and under development.
Documentation for the CAP may be found here.
Installation, Testing, and Running
Full instructions for running the CAP may be found here, including instructions for running in the cloud.
To install and run tests download the repo and run the setup command
python setup.py develop
python -m pytest tests
To run the CAP on some real data please see the demo
License
MIT License