Liu Mengxing's repositories
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anatROIs
Creates all kinds of volumetric ROIs that later can be used in diffusion MRI or other modalities. Integrates freesurfer, atlases, and other tools.
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RTP-pipeline
Docker based Gear that runs the Reproducible Tract Profiles (RTP) pipeline
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RTP-preproc
RTP-preproc runs the mrTrix3 preprocessing pipeline in the diffussion data. It uses FSLs topup when the optional inverted phase encoding files are found, otherwise uses the eddy tool. It performs some other denoising steps, and it can normalize or align to acpc the data
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story2016
fmri data analysis, natural story reading and listening data collected in IPCAS
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