Maxim Lippeveld's repositories
DeepClustering
Codebase for developing and testing deep clustering methods, specifically for imaging flow cytometry data.
deep-learning-biology
This repository contains the notebooks for the exercise sessions of the VIB Deep Learning for Biology workshop
riverreliability
Repository for the riverreliability python package. This package provides the riverreliability diagram and PEACE metric, as well as the confidence-reliability diagram and ECE metric.
singlecell-annotator
Manual annotation web app for single cell images.
artistic-heritage-regional-roads-code
Code repository containing code for deriving results from the "Artistic heritage of regional roads" dataset by Brussels Mobility
artistic-heritage-regional-roads-meta
Meta repository containing info about and results derived from the "Artistic heritage of regional roads" dataset by Burssels Mobility
bioformats2raw
Bio-Formats image file format to raw format converter
cellpose
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
dambi-hpc-guide
Basic and Advanced usage of High-Performance Computing in Bioinformatics
datasets
TFDS is a collection of datasets ready to use with TensorFlow, Jax, ...
django-image-cropping
Django helper application to easily and non-destructively crop arbitrarily large images in admin and frontend.
docker-base
Home Assistant base images
features
A collection of Dev Container Features managed by Dev Container spec maintainers. See https://github.com/devcontainers/feature-starter to publish your own
ifcimglib
This is a package for working with imaging cytometry data.
kaat-portfolio-static
Static web content for kaat-portfolio repo.
Local_Hough_Circle
An improved implementation
napari
napari: a fast, interactive, multi-dimensional image viewer for python
neuralnets
This code implements various useful utilities for training neural networks.
pycloudinary
Python package for cloudinary
RDM-LS
Session for Research Data Management in Life Sciences workshop on 10 Nov 2020. Creating and working with a reproducible data analysis environment.
seaborn
Statistical data visualization using matplotlib
single-cell-image-processing
Scalable single cell image processing software built on the SciJava framework. Can be used as ImageJ plugin or standalone CLI.
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
tailwindcss-portfolio-theme
Starter files for a Hugo theme with Tailwindcss