Matt Ralston's repositories
jekyll-now
Build a Jekyll blog in minutes, without touching the command line.
bioruby-samtools
Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-
speedcomplainer
A python app that will test your internet connection and then complain to your service provider (and log to a data store if you'd like)
bamreader
an object reading bams (for bioinformatics)
bgzf
inflate BGZF
istanbul-cobertura-badger
Create a Code Coverage badge for Node.js Apps running node-istanbul.
OPTICS-Automatic-Clustering
automatic hierarchical clustering of OPTICS reachability plots implemented in Python
suffix_tree
This is the python module suffix_tree v2.1, python bindings for a C implementation of Generalized Suffix Trees. http://www.daimi.au.dk/~mailund/suffix_tree.html
RepData_PeerAssessment2
This is the second assignment for the Reproducible Research course
galaxy
Data intensive biology for everyone.
RepData_PeerAssessment1
Peer Assessment 1 for Reproducible Research
ExData_Plotting1
Plotting Assignment 1 for Exploratory Data Analysis
GitHubVisualizer
Visualization the history of repository changes based on data from GitHub
instablog
Simple blogging website
bioblend
A Python library for interacting with CloudMan and Galaxy API
hacker-scripts
Based on a true story
cloudman
Easily create compute clusters on the Cloud.
ansible-cloudman-image
An Ansible role for building a machine image for CloudMan.
cloudlaunch
Easily launch your own cloud servers for use with Galaxy and CloudMan
tools-devteam
Contains a set of Galaxy Tools mostly written by the Galaxy Team.
DERails
Basic framework for interactive visualization of differential expression results from transcriptomic measurements (RNA-seq, microarray)
d3-legend
Simple legend for d3 using data-legend attributes on paths.
CBrowser
Genome Browser Application for Clostridium acetobutylicum
net-http-cheat-sheet
A collection of Ruby Net::HTTP examples.
leapday
GitHub Pages Theme: Leap Day
ScalaSort
First scala project. Very simple and incomplete implementation of mergesort.
Scalatest
A basic setup for a scala application
gemtest
This is my first gem and test using Rspec