MathCancer

Paul Macklin's repositories

PhysiCell

PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!

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PhysiCell-EMEWS

Official code repository for the PhysiCell-EMEWS project

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AMIGOS-hypoxia

AMIGOS project - hypoxia models (beware of leopards!)

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pc4cancerimmune

PhysiCell model of immune cells attacking a heterogeneous tumor

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BioFVM

BioFVM Mirror

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chemo

MIT020

COVID19

Rapid prototyping coalition for SARS-CoV-2 tissue infection dynamics

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EasyBMP

EasyBMP mirror

020

EasyBMPtoAVI

EasyBMPtoAVI mirror

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keras2cpp

This is a bunch of code to port Keras neural network model into pure C++.

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liver-mechanobiology

Internal development version for liver modeling project

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mathcancer.github.io

Future Mathcancer website

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motility

PhysiCell motility demo

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neat_images

neat images for illustrating PhysiCell and its applications

020

pc4covid19

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pc4thanos

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pc4worm

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pcISA

PhysiCell invader-scout-attacker model

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PhysiCell-Basic

BSD-3-Clause020

PhysiCell-EMEWS-2

PhysiCell-EMEWS-2 (for follow-up paper)

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PhysiCell-Test

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physicell_docs

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PVE-liver-mets

ABAQUS project files for Y. Wang et al. (2020) liver metastasis paper.

MIT010

thanos-vs-avengers

Sample model: Thanos versus the Avengers

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